If you are using the stable version, I would think that a uninstall and reinstall would do the trick. Be sure that you download a fresh copy, don't use the one that you tried before.
If you are trying to use the beta version, use the stable version. I have never had success setting up the beta version.
It sounds exactly like a JQuery conflict, but if you have not put anything on the site, then there should be no conflict.
You may need to make sure errors are viewable on your server. If not, and you are on a Debian/Ubuntu server you might be able to see those here.
Not sure of the location of CentOS/Redhat, but I'm guessing you could hunt that down.
It's likely that you are getting some of php error that you aren't seeing that would help you track this down.
The line that looks really interesting is this line:
2013/06/16 11:42:33 [error] 3040#0: *3 open() "/var/www/indianlakes/index.php/tools/required/page_controls_menu_js" failed (20: Not a directory), client: 192.168.1.10, server: , request: "GET
I'm thinking maybe I have my rewrite rules wrong, however it's weird that the other assets load fine. Hmmmm, back to the drawing board to figure this one out. I think it may also be related to PATH_INFO.